Annual Report National Culture Collection for Pathogens
CONTENTS Unit 01 Annual Report Unit 02 Unit 03
Unit 01
Introduction of National Culture Collection for pathogens Infrastructure in NCCP Unit 01 06 07
Collection and registration of pathogen resources in NCCP Registration of pathogen resources in 2017 10 11
12 13
Achromobacter insolitus Achromobacter xylosoxidans Achromobacter xylosoxidans Achromobacter xylosoxidans Achromobacter xylosoxidans Achromobacter xylosoxidans Acinetobacter bereziniae Acinetobacter bereziniae Acinetobacter guillouiae Acinetobacter johnsonii Acinetobacter junii Acinetobacter junii Acinetobacter junii Acinetobacter junii Acinetobacter junii Acinetobacter junii Acinetobacter lwoffii Acinetobacter radioresistens Acinetobacter radioresistens Acinetobacter ursingii Acinetobacter ursingii Acinetobacter ursingii Actinomyces oris Actinomyces urogenitalis Aeromonas hydrophila Aeromonas hydrophila Aeromonas veronii Aeromonas veronii Aeromonas veronii Aeromonas veronii Aggregatibacter aphrophilus Alcaligenes faecalis subsp. phenolicus Anaplasma phagocytophilum Arthrobacter woluwensis Bacillus cereus Bacillus subtilis Bacteroides faecis Bacteroides ovatus Bacteroides thetaiotaomicron petrii Brucella abortus Brucella abortus Burkholderia cenocepacia Burkholderia cenocepacia Burkholderia cepacia Burkholderia cepacia Burkholderia cepacia Burkholderia cepacia Burkholderia metallica Burkholderia metallica Burkholderia multivorans Burkholderia multivorans Burkholderia territorii Capnocytophaga ochracea Capnocytophaga sputigena 14 15
Cedecea davisae Cedecea davisae Chryseobacterium arthrosphaerae Chryseobacterium arthrosphaerae Chryseobacterium arthrosphaerae Chryseobacterium haifense Chryseobacterium hominis Chryseobacterium indologenes Chryseobacterium indologenes Chryseobacterium indologenes Chryseobacterium joenii Chryseobacterium molle Chryseobacterium treverense Citrobacter amalonaticus Citrobacter amalonaticus Citrobacter braakii Citrobacter braakii Citrobacter braakii Citrobacter europaeus Citrobacter farmeri Citrobacter farmeri Citrobacter koseri Citrobacter koseri Citrobacter koseri Citrobacter koseri Citrobacter koseri Citrobacter koseri Citrobacter koseri Citrobacter pasteurii Citrobacter sedlakii Clostridium subterminable Clostridium tertium Clostridium tertium Clostridium tertium Comamonas kerstersii Corynebacterium jeikeium Corynebacterium jeikeium Corynebacterium jeikeium Corynebacterium propinquum Corynebacterium resistens Corynebacterium simulans Corynebacterium striatum Corynebacterium striatum Corynebacterium striatum Corynebacterium striatum Corynebacterium striatum Corynebacterium striatum Corynebacterium striatum Corynebacterium striatum Corynebacterium striatum Corynebacterium striatum Corynebacterium striatum Corynebacterium tuberculostearicum Cronobacter sakazakii (Enterobacter sakazakii) Cupriavidus basilensis Delftia acidovorans Dysgonomonas capnocytophagoides Eggerthella lenta 16 17
Eggerthella lenta Elizabethkingia anophelis Elizabethkingia anophelis Elizabethkingia miricola Enterobacter aerogenes Enterobacter asburiae Enterobacter asburiae Enterobacter asburiae Enterobacter asburiae Enterobacter asburiae Enterobacter asburiae Enterobacter cancerogenus Enterobacter cancerogenus Enterobacter kobei Enterobacter ludwigii Enterobacter ludwigii Enterobacter ludwigii Enterobacter ludwigii Enterobacter mori Enterobacter tabaci Enterobacter tabaci Enterobacter xiangfangensis Enterococcus avium Enterococcus avium Enterococcus avium Enterococcus casseliflavus Enterococcus casseliflavus Enterococcus dispar Enterococcus durans Enterococcus gallinarum Enterococcus gallinarum Enterococcus hirae Enterococcus hirae Enterococcus hirae Enterococcus raffinosus Enterococcus raffinosus Escherichia coli Escherichia coli Escherichia coli Escherichia coli Escherichia coli Escherichia coli Escherichia coli Ewingella americana Ewingella americana Facklamia hominis Gemella jeonjuensis Gemella morbillorum Granulicatella adiacens Haemophilus haemolyticus Haemophilus parainfluenzae Haemophilus parainfluenzae Kerstersia gyiorum Kerstersia gyiorum Kluyvera ascorbata Lactobacillus fermentum Lactobacillus johnsonii Lactococcus lactis subsp. hordniae Massilia varians Mycobacterium arupense Mycobacterium aubagnense 18 19
Mycobacterium avium Mycobacterium avium Mycobacterium celatum Mycobacterium intracellulare Mycobacterium neoaurum Mycobacterium parascrofulaceum Mycobacterium peregrinum Myroides phaeus Paenibacillus timonensis Propionibacterium avidum Propionimicrobium lymphophilum Providencia rettgeri Pseudochrobactrum asaccharolyticum Pseudomonas aeruginosa Pseudomonas aeruginosa Pseudomonas aeruginosa Pseudomonas monteilii Roseomonas cervicalis Rothia dentocariosa Saccharopolyspora rectivirgula Salmonella Typhymurium Salmonella Typhymurium Salmonella Typhymurium Salmonella Bareilly Salmonella Bareilly Salmonella Blockley Salmonella Mbandak Salmonella Ohio Salmonella Ohio Salmonella Oranienburg Salmonella Oranienburg Salmonella Penama Salmonella Reading Salmonella Stanley Staphylococcus hominis subsp. hominis Staphylococcus hominis subsp. hominis Staphylococcus simulans Staphylococcus warneri cristatus oralis oralis subsp. tigurinus Absidia corymbifera Aspergillus fumigatus Aspergillus fumigatus Candida albicans Candida auris Candida auris Candida auris Candida catenulata Candida glabrata Candida glabrata Candida glabrata 20 21
Candida glabrata Candida glabrata Candida glabrata Candida glabrata Candida glabrata Candida haemulonii Candida lipolytica Candida lipolytica Candida metapsilosis Candida orthopsilosis Candida pelliculosa Candida pelliculosa Candida tropicalis Cladophialophora boppii Engyodontium album Exphiala oligosperma Fusarium oxysporum Fusarium solani Malassezia pachydermatis Malassezia pachydermatis Microsporum gypseum Penicillium chrysogenum Penicillium griseofulvum Rhizopus microsporus Saccharomyces cerevisiae Trichophyton rubrum Trichophyton rubrum Trichophyton rubrum 22 23
24 25
Deposit of R&D product Escherichia coli Enterobacter aerogenes Escherichia coli Enterococcus dispar oralis Achromobacter insolitus Achromobacter xylosoxidans Staphylococcus simulans Facklamia hominis Arthrobacter woluwensis Enterobacter asburiae cristatus 26 27
Pseudochrobactrum asaccharolyticum Gemella jeonjuensis Acinetobacter guillouiae Actinomyces oris Actinomyces urogenitalis Comamonas kerstersii Corynebacterium simulans Gemella morbillorum Lactobacillus johnsonii Paenibacillus timonensis Rothia dentocariosa Acinetobacter bereziniae Acinetobacter junii Acinetobacter junii Aeromonas veronii Aggregatibacter aphrophilus Alcaligenes faecalis ssp. Phenolicus Burkholderia multivorans Citrobacter braakii Citrobacter koseri Citrobacter koseri Clostridium tertium Corynebacterium jeikeium Corynebacterium jeikeium Corynebacterium resistens Corynebacterium striatum Corynebacterium striatum Corynebacterium striatum Corynebacterium striatum Corynebacterium striatum Corynebacterium striatum Corynebacterium striatum Corynebacterium striatum Corynebacterium tuberculostearicum Elizabethkingia miricola Enterobacter asburiae Kerstersia gyiorum Kluyvera ascorbata Lactobacillus fermentum Lactococcus lactis subsp. hordniae 28 29
Providencia rettgeri Staphylococcus hominis subsp. Hominis Staphylococcus hominis subsp. Hominis Staphylococcus warneri oralis subsp. Tigurinus Salmonella Mbandak Salmonella Oranienburg Salmonella Blockley Salmonella Bareilly Salmonella Bareilly Salmonella Penama Salmonella Oranienburg Salmonella Reading Salmonella Ohio Salmonella Ohio Salmonella Stanley Salmonella Typhymurium Salmonella Typhymurium Salmonella Typhymurium Starphylococcus aureus Starphylococcus aureus Starphylococcus aureus 30 31
Starphylococcus aureus Enterococcus faecium Enterococcus faecium Enterococcus faecium Enterococcus faecium Acinetobacter baumannii Acinetobacter baumannii 32 33
34 35
Opening status of pathogen resources in NCCP Orientia tsutsugamushi Orientia tsutsugamushi Orientia tsutsugamushi 36 37
Distribution status of pathogen resources in NCCP Escherichia Salmonella Staphylococcus Shigella Vibrio Bacillus Clostridium Campylobacter Pseudomonas Listeria Orienta Yersinia Neisseria Mycobacterium Klebsiella Haemophilus Proteus Enterobacter Other Candida Cryptococcus Trichosporon Aspergillus Penicillium Rhodotorula Saccharomyces Epidermophyton Microsporum Rhizopus Trichophyton Kloeckera Kodamaea Malassezia Influenza virus Dengue Adenovirus Enterovirus Measles virus Rhinovirus Coxsackievirus Mumps virus Chikungunya virus Zika virus Coronavirus Herpes simplex virus Japanese Encephalitis virus Respiratory Syncytial virus 38 39
Bioinformatic analysis of Pathogen resources 40 41
Development of NCCP pathogen resources Escherichia coli Listeria monocytogenes Salmonella enterica Typhimurium 42 43
Unit 03 44
2017 1 2 Unit 03 3 4 5 6 7 8 9 10 11 12 47
Un nit 03 48 49
Unit 03 50 51
Listeria monocytogenes Enterococcus faecium Enterococcus faecalis Salmonella typhimurium Salmonella heidelberg Salmonella dublin Staphylococcus aureus Bacilus cereus Escherichia coli Vibrio parahaemolyticus Dermabacter jilbonensis sp. nov Gordonia hongkongensis Conjugation of distributed pathogen resources Acidovorax temperans Acinetobacter radioresistens Acinetobacter nosocomialis Staphylococcus pettenkoferi Roseomonas mucosa Raoultella orinithinolytica Paenibacillus urinalis Corynebacterium striatum Corynebacterium falsenii Brevundimonas diminuta Brevibacillus borstelensis Bacillus marisflavi Bacillus infantis Providencia stuartii Bacillus cereus Bacillus infantis Bacillus licheniformis Bacillus pumilus Bacillus subtilis subsp. subtilis Bacillus subtilis Bacillus subtilis subsp. spizizenii Bacillus thuringiensis Bacillus spp. Listeria monocytogenes Shigella flexneri Escherichia coli Salmonella Typhimurium Unit 03 52 53
04 01 02 03 Unit 03 nit 03 nit 0 nit 0 Un Un 03 it Un 55 54
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ISSN : 2093-6478
National Culture Collection for Pathogens